Open Questions
This page preserves unresolved scientific and organizational questions.
Scientific Questions
- In IMMUNE HIERARCHY, how much of the altered adaptive immune outcome is driven by antigen abundance versus the source and context of antigen acquisition?
- Do replication-defective or miRNA-silenced influenza constructs promote broader APC sampling from intact virions rather than infected-cell debris?
- Why does PA targeting not produce the expected dominant CD8 shift if the canonical NP/PA hierarchy predicts a stronger PA-dependent effect?
- Is the major CD8 difference in the immune-hierarchy project primarily NP-associated, and what does that imply about peptide presentation and antigen capture?
- In ADAR LICENSING, does vertebrate RNAi machinery act mainly as an ADAR1 licensing layer during infection rather than as a canonical antiviral RNAi system?
- Which RNA-binding proteins beyond AGO2/RISC and DROSHA/DGCR8 influence ADAR1 substrate selection?
- Which respiratory vector platform has the best balance of payload capacity, tropism, manufacturability, immunogenicity, and redosing potential?
Atlas Questions
- Which person owns each project-family page?
- Which datasets support each major claim?
- Which project pages are manuscript-stage versus concept-stage?
- Which methods are mature enough to serve as lab standards?
- Which negative results or abandoned ideas should be documented before they are lost?