Source Manifest

This Atlas v0.4 was rebuilt from available uploaded knowledge-base files and the current voice-session people-node reconstruction.

Uploaded files incorporated or used as source material

Atlas snapshot

• Lab_Atlas_v0.3.docx

TENOEVER_LAB overview

• 00_Lab_Primer.md
• 01_Research_Vision.md
• 02_Program_Map.md
• 03_Publication_Strategy.md
• 04_Funding_Strategy.md
• 05_Lab_Management.md

VECTOR_DELIVERY

• 00_Project_Primer.md
• 01_Project_Encyclopedia.md
• 02_Methods.md
• 03_Datasets.md

RESPOND_PPG

• 00_Project_Primer.md
• 01_Project_Encyclopedia.md
• 02_Methods.md
• 03_Datasets.md

LONG_COVID

• 00_Project_Primer.md
• 01_Project_Encyclopedia.md
• 02_Methods.md
• 03_Datasets.md

IAV_KINKTURN / L7Ae

• 00_Project_Primer.md
• 01_Project_Encyclopedia.md
• 03_Datasets.md
• 04_Figures.md

IAV_FITNESS

• 00_Project_Primer.md
• 02_Methods.md
• 03_Datasets.md

LHS_INITIATIVE / TRACE

• 01_Project_Encyclopedia.md
• 02_Methods.md
• 03_Datasets.md
• 04_Figures.md

ADAR_LICENSING

• ADAR-related Datasets/Figures snippets visible in available uploaded file search results.

Caveat

This rebuild uses the content available to ChatGPT from uploaded-file search results and the current conversation. Where source snippets indicate that primary paths, raw datasets, final figures, or exact filenames were not available, the Atlas preserves that uncertainty with TODO fields rather than inventing details.

v0.5 Additions

• tenOever_lab_repositioning_memo_for_website(2).pdf — strategic memo used to reorganize the Atlas around three connected lanes: mechanistic pathogenesis, programmable immune instruction, and respiratory delivery and therapy.
• Voice-planning discussion on 2026-07-09 — used to refine IMMUNE HIERARCHY and ADAR LICENSING conceptual framing. Day-to-day experimental status intentionally deferred.